ARCOS
ARCOS - Automated recognition of collective signalling events
ARCOS is a computational method to detect and quantify collective phenomena. The algorithm was designed with the signaling of epithelial cells in mind however it is also applicable to other systems even outside of the realm of cell biology.
We provide several open-source implementations of ARCOS
Python (arcos4py)
R (ARCOS)
Plugin for Napari image viewer (arcos-gui)
ARCOS is now published in the Journal of Cell Biology (JCB): https://doi.org/10.1083/jcb.202207048
Detecting Collective events with ARCOS
How to get ARCOS
pageAvalilable ImplementationsHow to use ARCOS
pageDetecting Collective signalling events in epithelial CellspageAnalysing Collective Phenomena in HoneybeesOverview of how ARCOS works
Learn the fundamentals of ARCOS to get a deeper understanding of our main features:
pageEvent Detection and TrackingpageData RequirementspagePreprocessingIf you use this method in your research, please cite our paper:
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